PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_010095991.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Moraceae; Morus
Family Trihelix
Protein Properties Length: 368aa    MW: 40062.5 Da    PI: 10.1383
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_010095991.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix47.83.9e-1556138186
        trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     +W++  v  L+ea++ ++   +r+klk+++We+v++++      ++  ++++qCk+k+e+++kry+ + + + +       ++p++++l+
  XP_010095991.1  56 EWSEGAVSSLLEAYEGKWVLRNRAKLKGHDWEDVARYVssraNCTKSPKTQTQCKNKIESMKKRYRSESTADAS-------SWPLYSRLD 138
                     5*************************************854444555566679*************99988876.......489888886 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138375.6E-1854138No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MDKETNQQEN PSLLPNNATI VGAAATVIIV PKEESPRKPF GGGGGGTGGD RLKRDEWSEG  60
AVSSLLEAYE GKWVLRNRAK LKGHDWEDVA RYVSSRANCT KSPKTQTQCK NKIESMKKRY  120
RSESTADASS WPLYSRLDLL LRGGNGPSAA AAAAAAQTLQ SPAPPTPLSL PPSNNSALVL  180
LEPISTAPPP PPPPPPPACP HPPPPPPLGT AQNSHGSNGV DRLAKEDHEA VNKILSDHAS  240
DKNNSMETTS DSSTPALYSK KAEKMRLRSK TTNKMMRMEK KKRKRKELEL DIAESIRWLA  300
EAVVKSEQAR MEGMREIERM RVEAEAKRAE MDLKRTEIIA NTQLEIARLF AASGVGKAVD  360
SSLRIGRN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1279285KKKRKRK
2280285KKRKRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010095991.10.0hypothetical protein L484_023980
TrEMBLW9R0Q50.0W9R0Q5_9R
STRINGPOPTR_0001s06580.11e-129(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49943350
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54390.11e-52sequence-specific DNA binding transcription factors